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Welcome to the GenomeWeb Fungal Genome Databases Search for:

Yeast Databases

Other Species

Detailed information on the above options

Yeast Genome Project
Holds the complete genome of Saccharomyces cerevisiae.

• Text search of annotation in MIPS yeast database entries
• Text search of yeast entries in PIR
• TEXT search of yeast homologs to human ESTs
• Search of over/under represented N-mers in the S. cerevisiae chromosomes
• Search for yeast gene names
• xChromo - view a whole chromosome
• Get DNA fragments
• Get Protein sequences
• Protein homology search
• Genome-Browser - Compare yeast chromosomes to each other

Saccharomyces cerevisiae Genome Database
The SGD project collects information for and maintains a database of the yeast Saccharomyces cerevisiae. This database includes a variety of genomic and biological information.

The complete sequence of Saccharomyces cerevisiae, strain S288C, is now public and can be retrieved from SGD (USA), MIPS (Germany), or EBI (England). Sequence searches using BLAST and FASTA are available from SGD. A summary of the yeast chromosomes is being assembled, including references, maps, and a DNA sequence retrieval form. SGD has begun the process of integrating the newly released sequence within its database and is waiting for the standard ORF designations from the authors.

Genome Navigator: Saccharomyces cerevisiae Genome Index
S.cerevisiae genome is available for viewing using a Java map display tool, DerBrowser. Among other features, it allows for quering external data sources: SacchDB, MIPS, YPD and GeneQuiz.

Yeast Protein Database (YPD)
YPD is a database of Gene names and properties of the Saccharomyces cerevisiae proteins of known sequence.

The Schizosaccharomyces pombe Genome Sequencing Project
The fission yeast Schizosaccharomyces pombe is a unicellular ascomycete. It has a simple eukaryotic genome of approximately equivalent size to that of budding yeast, Saccharomyces cerevisiae, at around 14 Mb. Unlike S. cerevisiae, the S. pombe genome is spread between only three chromosomes.

Yeast gene relationships
This is a database of yeast gene relationships based on data made available by Eisen et al. (PNAS Vol 95, p14863). This database catalogues the 2500 genes analyzed and gives the closest related genes based on a probabilistic analysis.

Mycological Resources
The Mycology page gives details of many mycology sites, resources and information.

The Neurospora Genome Project
The Neurospora Genome Project (NGP) represents an effort to obtain partial or complete nucleotide sequences from a large number of cDNA clones derived from conidial, mycelial, and perithecial libraries of N. crassa.

• blast searches
• project description
• Neurospora information

Candida albicans
Information on molecular biology and the genome of C. albicans.

• Genetics
  • list of cloned genes
  • morphological mutants
• Physical map
  • Organization of the mapping data
  • Chromosomes
  • list of DNA probes
  • Mapping information in the fosmid database
  • Strains used for mapping and their morphology
• Sequence data
  • Summary of sequenced genes
  • C. albicans Genbank entries
  • Unpublished sequences
  • Primers for PCR of Candida gene
• Candida resources

Fungal Genome Resource
The Fungal Genome Resource has been established to promote research in the area of fungal genetics.

• Physical Maps of Aspergillus Nidulans.
• Fungal Genome Database
• mapping software used to create physical maps of fungi.
• Information on ODS, a Physical Mapping Software.
• Information on the management plan for the Fungal Genome Resource.